Esin B. Sözer

Research Assistant Professor

Frank Reidy Research Center for Bioelectrics

Laboratory of multiscale bioelectrical interactions


I wrote these image analysis scripts with MATLAB (https://www.mathworks.com/), mainly to be able to track slow movement of suspension cells during time series recordings. The filenames are in the format that Leica software generates when microscopy images are exported as tiff. I also have some scripts that can plot fluorescence data of a population of cells. Feel free to reach out to me if you have questions on how to use these scripts. MainScriptRun_201907 is the one that calls the functions to run the image analysis. Start running it section by section for analysis. I don't guarantee the scripts are error-free. If you use them please contact me for the right citation.